Swank Laboratory
HOME QUESTIONS PUBLICATIONS MEMBERS EVENTS DONATE
The Transgenic Fly

Molecular biology techniques such as PCR and restriction digests are employed to generate myosin transgenes that are injected into Drosophila embryos to create transgenic fly lines. The transgene might be designed to express myosin with a mutation that causes muscle or heart diseases in humans.

http://www.pinkjooz.com/index.php/
dna-will-store-entire-mankinds-knowledge

Protein Engineering

To determine the role of various domains of proteins to their function, we can mutate specific amino acids or exchange entire domains between protein isoforms. Two specific domains being tested are the converter and the relay domain of muscle myosin. Using the transgenic fly as a vessel for expressing engineered proteins, we can observe the functional effects on muscle and heart performance.

Stopped-Flow

To determine rate constants of the cross-bridge cycle, including phosphate release, ADP release, and ATP affinity, we are collaborating with the laboratory of Dr. Susan Gilbert. This technique combines isolated myosin S1, ATP, actin, and fluorophores in very small volumes. By observing the changes in fluorescence, we can calculate presteady-state rates with millisecond time resolution. Shown below is phosphate release rate data.
Left: Representative transients at different [ATP]. Right: The exponential rates of Pi release are plotted as a function of [ATP]. A kmax of 90.5 +/- 3.1 s-1 was obtained by fitting the data.

Muscle Mechanics

We evaluate muscle mechanical properties using the skinned fiber technique. The mechanics apparatus includes a pair of hooks, one attached to a force transducer and the other to a high-speed length motor. The muscle fiber is mounted onto the hooks and lowered into a solution chamber. By varying the concentrations of the solution components and imposing various length perturbations on the fiber, we measure muscle properties such as power, force, velocity, stiffness, and rate constants of the myosin cross-bridge cycle. We primarily test the mechanical properties of indirect flight and jump muscles from our transgenic Drosophila, but recently have begun evaluating cultured myotubes and tendons grown from muscle cell lines and fibroblasts.

Muscle Dissection

Indirect Flight muscle preparation: The steps of preparing an IFM fiber for mechanical measurements are A) isolation of the thorax by removing the head, abdomen and wings, B) splitting the thorax in half and immersing it in skinning solution, C) removing the bundle of DLM fibers, D) separating the 6 fibers in the bundle from each other, E) splitting one of the fibers in half, F) clamping the tabs of the T-clips around the ends of the fiber to produce G) a clipped IFM fiber preparation.
Jump muscle preparation: After isolating the thorax, the jump muscle is A) removed from the half thorax by cutting as shown by the red dotted lines. B) The jump muscle is pared down in size and C) the two-layered muscle is split open to become one single layer of fibers. D) A strip of 8-10 fibers is cut from the muscle and E) fastened between two T-clips.

Locomotion Assays

These assays are fun and fast ways to characterize the basic locomotion properties of our mutant fly lines. Assays include flight ability, wing beat frequency, wing stroke amplitude, and jump ability. This analysis reveals the influence of changes in muscle mechanical performance on locomotion, sometimes in unexpected ways.
Wing Beat Frequency: The wings of the fruit fly interrupt the flow of light from the flashlight to the tachometer. Using a Fourier Transform, a computer program anaylzes the frequency of variation in light intensity, calculating the beats per second of a fruit fly's wings.
Wing Stroke Amplitude: A) Sample image showing how wing stroke angle is measured. B) Side view of fruit fly. The blue arrow shows the alignment of the camera lens with respect to the fly. The camera is lined up perpendicular to the wing path, not the parallel to the long axis of the fly's body.

In vitro Motility Assays

We characterize actin and myosin interactions in the absence of any other muscle proteins in the in vitro motility assay. Myosin is purified from our fruit flies and then adhered to a glass coverslip flow cell. Fluorescently-labeled actin filaments are moved by the myosin heads, powered by MgATP hydrolysis (see video clip). We measure the actin velocity to determine the influence of mutations on myosin performance.

HOME QUESTIONS PUBLICATIONS MEMBERS EVENTS DONATE

Contact Info: Dr. Douglas Swank: swankd@rpi.edu
RPI Home Page | School of Science | Biology Department
Graduate Program | Undergraduate Program

Updated 9/15/2017
Site design, creation, and maintainence by Chris Newhard.
Questions or Comments? Contact the webmaster